These are examples of GWAS Catalog entities shipped with gwasrapidd:
Usage
studies_ex01
studies_ex02
associations_ex01
associations_ex02
variants_ex01
variants_ex02
traits_ex01
traits_ex02
Format
- studies_ex01
An S4 studies object of 2 studies:
'GCST001585'
and'GCST003985'
.- studies_ex02
An S4 studies object of 2 studies:
'GCST001585'
and'GCST006655'
.- associations_ex01
An S4 associations object of 4 associations:
'22509'
,'22505'
,'19537565'
and'19537593'
.- associations_ex02
An S4 associations object of 3 associations:
'19537593'
,'31665940'
and'34944736'
.- variants_ex01
An S4 variants object of 3 variants:
'rs146992477'
,'rs56261590'
and'rs4725504'
.- variants_ex02
An S4 variants object of 4 variants:
'rs56261590'
,'rs4725504'
,'rs11099757'
and'rs16871509'
.- traits_ex01
An S4 traits object of 3 traits:
'EFO_0004884'
,'EFO_0004343'
and'EFO_0005299'
.- traits_ex02
An S4 traits object of 4 traits:
'EFO_0007845'
,'EFO_0004699'
,'EFO_0004884'
and'EFO_0004875'
.
An object of class studies
of length 1.
An object of class associations
of length 1.
An object of class associations
of length 1.
An object of class variants
of length 1.
An object of class variants
of length 1.
An object of class traits
of length 1.
An object of class traits
of length 1.